Siddhartha Kundu | Mathematics | Best Researcher Award

Assoc. Prof. Dr. Siddhartha Kundu | Mathematics |  Best Researcher Award

Associate Professor at All India Institute Of Medical Sciences Delhi, India

Dr. Siddhartha Kundu is an Associate Professor in the Department of Biochemistry at the All India Institute of Medical Sciences (AIIMS), New Delhi. He holds an MBBS, MD, and PhD, and brings extensive expertise in clinical biochemistry and molecular diagnostics. With a strong background in academic research and teaching, Dr. Kundu has contributed to several national and international scientific publications. He is actively engaged in advancing biochemical research and medical education in India.

Profile:

Professional Experience:

With over 20 years of post-MD experience, Dr. Siddhartha Kundu is a medical doctor and biochemical scientist with recognized contributions in teaching, research, and academic leadership.

  • Teaching/Research: 18+ years

  • Advisory Roles: 2+ years

  • Leadership Positions: 2+ years

Research Interests:

  • Mathematical Modeling of macromolecules and complex biochemical systems (both physiological and pathological)

  • Bioinformatics & Algorithm Development for molecular biology applications

Technical Skills:

  • Programming Languages: PERL, C, Python

  • Data Analysis Platforms: R, Cygwin

  • Bioinformatics: Algorithm design, modeling, and simulation

Editorial Contributions:

  • Invited Reviewer for peer-reviewed journals such as:

    • Scientific Reports

    • Bioinformatics

    • PLOS ONE

    • Indian Journal of Medical Research (IJMR)

Research Output:

(A) Software and Servers Developed

  1. TemporalGSSA
    R package for time-step parameterization in biochemical networks.

  2. ReDirection
    R package for calculating dissociation constants and dominant reaction direction.

  3. ProTG4
    Web server predicting protein sequences from TG4-mapped peptide libraries.

  4. Fe2OG
    Web server predicting Fe(II)/2-oxoglutarate-dependent dioxygenase functions.

(B) Selected Peer-Reviewed Publications

(Author is sole and corresponding author in most; # = single author, * = corresponding)

  1. Kundu S#*. Scientific Reports (2024) – Dissociation constants in biochemical networks.

  2. Kundu S#*. Front Mol Biosci (2023) – ReDirection R-package.

  3. Kundu S#*. Math Biosci Eng (2022) – Ligand interactions as eigenvalue functions.

  4. Kundu S#*. J Bioinf Comp Biol (2022) – TemporalGSSA.

  5. Kundu S#*. Bioinform Biol Insights (2021) – ProTG4 server.

(Full publication list available upon request or via PubMed search)

(C) Conferences, Abstracts & Chapters

  • Conference Abstract: “Role of mathematical models in elucidating biochemical rules”, WGC Singapore (2018).

  • Book Reviews: National Medical Journal of India (2005), Indian Journal of History of Science (2006)

(D) Posters

Presented at:

  • BIOSPARKS 2018, JNU, New Delhi

  • 3rd International Plant Physiology Congress, JNU

  • 3rd International Conference on Integrative Biology, Valencia, Spain

Honors and Awards:

  • AIIMS Excellence in Research Award2021, 2022

Additional Information:

  • Dr. Kundu is a passionate educator and innovator in the application of mathematical and computational models to unravel biological complexity. His work bridges medical biochemistry, theoretical biology, and systems modeling.

Citation Metrics:

  • Total Citations: 133

  • Citations since 2020: 78

  • h-index: 7

  • h-index since 2020: 6

  • i10-index: 5

  • i10-index since 2020: 1

Publication Top Notes:

  • Insights into the molecular mechanism of apoptosis induced by TNF-α in mouse epidermal JB6-derived RT-101 cells
    N. Singh, N. Khanna, H. Sharma, S. Kundu, S. Azmi
    Biochemical and Biophysical Research Communications, 2002

  • Distribution and prediction of catalytic domains in 2-oxoglutarate dependent dioxygenases
    S. Kundu
    BMC Research Notes, 2012

  • Origin, evolution, and divergence of plant class C GH9 endoglucanases
    S. Kundu, R. Sharma
    BMC Evolutionary Biology, 2018

  • In silico identification and taxonomic distribution of plant class C GH9 endoglucanases
    S. Kundu, R. Sharma
    Frontiers in Plant Science, 2016

  • Unity in diversity: A systems approach to regulating plant cell physiology by 2-oxoglutarate-dependent dioxygenases
    S. Kundu
    Frontiers in Plant Science, 2015

  • Co-operative intermolecular kinetics of 2-oxoglutarate dependent dioxygenases may be essential for system-level regulation of plant cell physiology
    S. Kundu
    Frontiers in Plant Science, 2015

  • Insights into the mechanism(s) of digestion of crystalline cellulose by plant class C GH9 endoglucanases
    S. Kundu
    Journal of Molecular Modeling, 2019

  • Stochastic modelling suggests that an elevated superoxide anion-hydrogen peroxide ratio can drive extravascular phagocyte transmigration by lamellipodium formation
    S. Kundu
    Journal of Theoretical Biology, 2016

  • Mathematical modeling and stochastic simulations suggest that low-affinity peptides can bisect MHC-I mediated export of high-affinity peptides into “early”- and “late”-phases
    S. Kundu
    Heliyon, 2021

  • Modeling ligand-macromolecular interactions as eigenvalue-based transition-state dissociation constants may offer insights into biochemical function of the resulting complexes
    S. Kundu
    Mathematical Biosciences and Engineering, 2022

  • ReDirection: An R-package to compute the probable dissociation constant for every reaction of a user-defined biochemical network
    S. Kundu
    Frontiers in Molecular Biosciences, 2023

  • Fe(II)OG: An integrated HMM profile-based web server to predict and analyze putative non-haem iron (II)- and 2-oxoglutarate-dependent dioxygenase function in protein sequences
    S. Kundu
    BMC Research Notes, 2021

  • Mathematical basis of improved protein subfamily classification by a HMM-based sequence filter
    S. Kundu
    Mathematical Biosciences, 2017

  • A mathematically rigorous algorithm to define, compute and assess relevance of the probable dissociation constants in characterizing a biochemical network
    S. Kundu
    Scientific Reports, 2024

  • TemporalGSSA: A numerically robust R-wrapper to facilitate computation of a metabolite-specific and simulation time-dependent trajectory from stochastic simulation algorithm output
    S. Kundu
    Journal of Bioinformatics and Computational Biology, 2022

 

Abhinav Singhal | Mathematics | Best Researcher Award

Dr. Abhinav Singhal | Mathematics | Best Researcher Award

Assistant Professor Christ University, Bengaluru, India, 560029. India

Dr. Abhinav Singhal is an accomplished researcher and academician currently serving as an Assistant Professor in the Department of Science (Mathematics) at CHRIST (Deemed to be University), Delhi-NCR Campus, Ghaziabad. With a deep-rooted passion for Theoretical and Computational Seismology, his work explores seismic wave propagation in advanced materials like piezoelectric and piezomagnetic composites. He is recognized for his innovative approach and interdisciplinary expertise, combining seismology with applied mathematics. 💡

Profile

Scopus

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Orcid

🎓 Education

Dr. Singhal earned his Ph.D. from the Indian Institute of Technology (ISM), Dhanbad under the guidance of Dr. Sanjeev A. Sahu. His doctoral thesis titled “Analysis of Seismic Wave Transference in Layered Structures including Piezo-composites with distinct interfacial conditions” reflects his dedication to advanced geophysical modeling. Prior to that, he qualified prestigious national exams including IIT-JAM (AIR 85), GATE 2014 (AIR 369), and ISM-JRF (AIR 3). 🎓📘

👨‍🏫 Experience

Dr. Singhal began his academic journey as a Teaching Assistant at IIT (ISM) Dhanbad (2016–2018), where he taught Numerical Analysis. He then worked as an Assistant Professor at Madanapalle Institute of Technology and Sciences (2018–2020), and MS Ramaiah University of Applied Sciences (2020–2021), where he taught subjects like Partial Differential Equations, Probability & Statistics, and Discrete Mathematics. Currently, he contributes to CHRIST University, actively engaging in academic and administrative roles including IQAC, NBA, and Research Coordination. 🧑‍🏫📊

🔬 Research Interests

Dr. Singhal’s core research interests lie in Theoretical and Computational Seismology, particularly in the study of regional wave propagation across layered structures and smart materials. His work explores wave behaviors in piezoelectric, piezomagnetic, and FGPM media, focusing on both shear horizontal and anti-plane waves, using methods from applied mathematics. He is passionate about integrating flexoelectric, viscoelastic, and fractional-order models in geophysical modeling. 🌍📐

🏆 Awards

🎖️ In recognition of his outstanding research contributions, Dr. Abhinav Singhal was honored with the Research Appreciation Award (2019) by the Madanapalle Institute of Technology and Sciences, Andhra Pradesh. His commitment to academic excellence and scientific innovation continues to inspire students and peers alike.

📚 Publications Top Notes: 

Dr. Singhal has authored numerous high-impact research papers in SCI/SCIE journals, most of which focus on wave propagation in smart and layered materials. His works are widely cited, showcasing his contribution to the field. Below are his major publications:

🧠 Theoretical investigation of SH wave transmission in magneto electro‐elastic structure having imperfect interface using approximating method — Applied Physics A (2024), Cited by: X

🌀 Nonlinear Surface Effects Study… in Orthotropic Piezoelectric Materials — Journal of Applied Mechanics (ASME) (2024), Cited by: X

💥 Love-type wave velocity in bedded piezo-structure — ZAMM (2024), Cited by: X

🔧 SH and Anti-plane SH waves in Orthotropic Piezoelectric Quasicrystal — Acta Mechanica (2024), Cited by: X

🧩 Surface wave in flexoelectric plate with viscoelastic coating — Physica Scripta (2024), Cited by: X

🧲 Interface Effects in Piezoelectric Quasicrystal — Acta Mechanica Sinica (2024), Cited by: X

⚙️ Surface wave velocity in rheological models with flexoelectric effect — J. Braz. Soc. Mech. Sci. Eng. (2025), Cited by: X

🔍 Imperfect interfaces in cobalt ferrite plates — Discover Materials (2024), Cited by: X

🔬 Wave signals for nanosensor applications using PZT models — Acta Mechanica (2025), Cited by: X

🌊 Surface Acoustic Waves in Piezoelectric PlateInt. J. of Dynamics and Control (2024), Cited by: X

🧱 Wave reflection in pre-stressed solids with dual porosityEuropean J. of Mechanics – A/Solids (2025), Vol. 111, Article: 105565. IF: 4.3

🌐 Size-dependent surface wave in fractured porous seabed — Mechanics of Advanced Materials and Structures (2025), IF: 3.6